ERDDAP > tabledap > Data Access Form

Dataset Title:	Phytoplankton data collected during cruise 25 of R/V Skif (January 1990) in the Indian sector of the Southern Ocean
Institution:	UkrSCES, NASU-IBSS   (Dataset ID: phyto_cosmos_1990)
Information:	Summary | License | FGDC | ISO 19115 | Metadata | Background | Subset | Files | Make a graph

 

Variable	Optional Constraint #1		Optional Constraint #2		Minimum    or a List of Values	Maximum
ScientificName (Not applicable)	!= =~ <= >= = < >		!= =~ <= >= = < >		"Amphidinium" "Amphiprora" "Amphiprora gigantea" "Amphiprora kjellmanii" "Asteromphalus heptactis" "Asteromphalus hyalinus" "Asteromphalus parvulus" "Biddulphia striolata" "Chaetoceros" "Chaetoceros atlanticus" "Chaetoceros criophilus" "Chaetoceros curvisetus" "Chaetoceros dichaeta" "Chaetoceros diversus" "Chaetoceros flexuosus" "Chaetoceros neglectus" "Chaetoceros schimperianus" "Chaetoceros tortissimus" "Coccolithus pelagicus" "Cocconeis distans" "Corethron criophilum" "Coscinodiscus" "Coscinodiscus inflatus" "Dactyliosolen antarcticus" "Diploneis notabilis" "Distephanus speculum" "Distephanus speculum var. octonarius" "Eucampia balaustium" "Exuviaella" "Fragilariopsis" "Fragilariopsis antarctica" "Fragilariopsis curta" "Fragilariopsis cylindrus" "Fragilariopsis obliquecostata" "Fragilariopsis rhombica" "Glenodinium" "Glenodinium lenticula" "Glenodinium paululum" "Glenodinium pilula" "Gymnodinium" "Gymnodinium wulffii" "Gyrodinium" "Gyrodinium lachryma" "Navicula" "Navicula antarctica" "Navicula directa var. oceanica" "Navicula halophila" "Nitzschia" "Nitzschia antarctica" "Nitzschia barkleyi" "Nitzschia closterium" "Nitzschia longissima" "Nitzschia seriata" "Peridinium" "Peridinium defectum" "Peridinium divergens" "Peridinium elegans" "Peridinium minusculum" "Phaeocystis antarctica" "Rhizosolenia alata f. inermis" "Rhizosolenia chunii" "Rhizosolenia hebetata f. semispina" "Rhizosolenia shrubsolei" "Rhizosolenia truncata" "Schimperiella antarctica" "Skeletonema costatum" "Synedra tabulata" "Thalassiosira antarctica" "Thalassiosira dubia" "Thalassiosira gracilis" "Thalassiosira hyalina" "Thalassiosira nana" "Thalassiosira rotula" "Thalassiothrix" "Thalassiothrix antarctica" "Tropidoneis" "Tropidoneis antarctica" "Tropidoneis belgicae"
BasisOfRecord (None)	!= =~ <= >= = < >		!= =~ <= >= = < >		"HumanObservation"
InstitutionCode (None)	!= =~ <= >= = < >		!= =~ <= >= = < >		"IBSS"	"IBSS"
YearCollected (None)	!= =~ <= >= = < >		!= =~ <= >= = < >		1990.0
MonthCollected (None)	!= =~ <= >= = < >		!= =~ <= >= = < >		1.0
DayCollected (None)	!= =~ <= >= = < >		!= =~ <= >= = < >		27.0 28.0 29.0
time (UTC)	!= =~ <= >= = < >		!= =~ <= >= = < >		1990-01-27T01:00:00Z	1990-01-29T01:00:00Z
MinimumDepth (None)	!= =~ <= >= = < >		!= =~ <= >= = < >		0.0	100.0
MaximumDepth (None)	!= =~ <= >= = < >		!= =~ <= >= = < >		0.0	100.0
longitude (degrees_east)	!= =~ <= >= = < >		!= =~ <= >= = < >		75.0	75.0
latitude (degrees_north)	!= =~ <= >= = < >		!= =~ <= >= = < >		-68.0	-64.5
aphia_id (Not applicable)	!= =~ <= >= = < >		!= =~ <= >= = < >		NaN
occurrenceID (None)	!= =~ <= >= = < >		!= =~ <= >= = < >		"IBSS_ANT_SKIF_25_P..."	"IBSS_ANT_SKIF_25_P..."
Cell_volume (Cubic centimetres)	!= =~ <= >= = < >		!= =~ <= >= = < >		"1000"	"9954"
WaterAbund (Number per millilitre)	!= =~ <= >= = < >		!= =~ <= >= = < >		"1000"	"98100"

 

Server-side Functions

distinct()

orderBy orderByDescending orderByClosest orderByCount orderByLimit orderByMax orderByMin orderByMinMax orderByMean orderBySum (" ScientificName BasisOfRecord InstitutionCode YearCollected MonthCollected DayCollected time MinimumDepth MaximumDepth longitude latitude aphia_id occurrenceID Cell_volume WaterAbund ScientificName BasisOfRecord InstitutionCode YearCollected MonthCollected DayCollected time MinimumDepth MaximumDepth longitude latitude aphia_id occurrenceID Cell_volume WaterAbund ScientificName BasisOfRecord InstitutionCode YearCollected MonthCollected DayCollected time MinimumDepth MaximumDepth longitude latitude aphia_id occurrenceID Cell_volume WaterAbund ScientificName BasisOfRecord InstitutionCode YearCollected MonthCollected DayCollected time MinimumDepth MaximumDepth longitude latitude aphia_id occurrenceID Cell_volume WaterAbund ScientificName BasisOfRecord InstitutionCode YearCollected MonthCollected DayCollected time MinimumDepth MaximumDepth longitude latitude aphia_id occurrenceID Cell_volume WaterAbund ")

File type: (more information) .asc - View OPeNDAP-style ISO-8859-1 comma-separated text. .csv - Download a ISO-8859-1 comma-separated text table (line 1: names; line 2: units; ISO 8601 times). .csvp - Download a ISO-8859-1 .csv file with line 1: name (units). Times are ISO 8601 strings. .csv0 - Download a ISO-8859-1 .csv file without column names or units. Times are ISO 8601 strings. .dataTable - A JSON file formatted for use with the Google Visualization client library (Google Charts). .das - View the dataset's metadata via an ISO-8859-1 OPeNDAP Dataset Attribute Structure (DAS). .dds - View the dataset's structure via an ISO-8859-1 OPeNDAP Dataset Descriptor Structure (DDS). .dods - OPeNDAP clients use this to download the data in the DODS binary format. .esriCsv - Download a ISO_8859_1 .csv file for ESRI's ArcGIS 9.x and below (separate date and time columns). .fgdc - View the dataset's UTF-8 FGDC .xml metadata. .geoJson - Download longitude,latitude,otherColumns data as a UTF-8 GeoJSON .json file. .graph - View a Make A Graph web page. .help - View a web page with a description of tabledap. .html - View an OPeNDAP-style HTML Data Access Form. .htmlTable - View a UTF-8 .html web page with the data in a table. Times are ISO 8601 strings. .iso19115 - View the dataset's ISO 19115-2/19139 UTF-8 .xml metadata. .itx - Download an ISO-8859-1 Igor Text File. Each response column becomes a wave. .json - View a table-like UTF-8 JSON file (missing value = 'null'; times are ISO 8601 strings). .jsonlCSV1 - View a UTF-8 JSON Lines CSV file with column names on line 1 (mv = 'null'; times are ISO 8601 strings). .jsonlCSV - View a UTF-8 JSON Lines CSV file without column names (mv = 'null'; times are ISO 8601 strings). .jsonlKVP - View a UTF-8 JSON Lines file with Key:Value pairs (missing value = 'null'; times are ISO 8601 strings). .mat - Download a MATLAB binary file. .nc - Download a flat, table-like, NetCDF-3 binary file with COARDS/CF/ACDD metadata. .ncHeader - View the UTF-8 header (the metadata) for the NetCDF-3 .nc file. .ncCF - Download a NetCDF-3 CF Discrete Sampling Geometries file (Contiguous Ragged Array). .ncCFHeader - View the UTF-8 header (the metadata) for the .ncCF file. .ncCFMA - Download a NetCDF-3 CF Discrete Sampling Geometries file (Multidimensional Array). .ncCFMAHeader - View the UTF-8 header (the metadata) for the .ncCFMA file. .nccsv - Download a NetCDF-3-like 7-bit ASCII NCCSV .csv file with COARDS/CF/ACDD metadata. .nccsvMetadata - View the dataset's metadata as the top half of a 7-bit ASCII NCCSV .csv file. .ncoJson - Download a UTF-8 NCO lvl=2 JSON file with COARDS/CF/ACDD metadata. .odvTxt - Download longitude,latitude,time,otherColumns as an ISO-8859-1 ODV Generic Spreadsheet File (.txt). .subset - View an HTML form which uses faceted search to simplify picking subsets of the data. .tsv - Download a ISO-8859-1 tab-separated text table (line 1: names; line 2: units; ISO 8601 times). .tsvp - Download a ISO-8859-1 .tsv file with line 1: name (units). Times are ISO 8601 strings. .tsv0 - Download a ISO-8859-1 .tsv file without column names or units. Times are ISO 8601 strings. .wav - Download a .wav audio file. All columns must be numeric and of the same type. .xhtml - View a UTF-8 XHTML (XML) file with the data in a table. Times are ISO 8601 strings. .kml - View a .kml file, suitable for Google Earth. .smallPdf - View a small .pdf image file with a graph or map. .pdf - View a standard, medium-sized .pdf image file with a graph or map. .largePdf - View a large .pdf image file with a graph or map. .smallPng - View a small .png image file with a graph or map. .png - View a standard, medium-sized .png image file with a graph or map. .largePng - View a large .png image file with a graph or map. .transparentPng - View a .png image file (just the data, without axes, landmask, or legend).

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The Dataset Attribute Structure (.das) for this Dataset

Attributes {
 s {
  ScientificName {
    String long_name "ScientificName";
    String sdn_P02_name "SeaDataNet biological format biotic parameters";
    String sdn_P02_uri "https://vocab.nerc.ac.uk/collection/P02/current/BPRP/";
    String sdn_P02_urn "SDN:P02::BPRP";
    String sdn_parameter_name "Taxon of biological entity specified elsewhere";
    String sdn_parameter_uri "https://vocab.nerc.ac.uk/collection/P01/current/SCNAME01/";
    String sdn_parameter_urn "SDN:P01::SCNAME01";
    String sdn_uom_name "Not applicable";
    String sdn_uom_uri "https://vocab.nerc.ac.uk/collection/P06/current/XXXX/";
    String sdn_uom_urn "SDN:P06::XXXX";
    String standard_name "scientificname";
    String units "Not applicable";
    String units_uri "https://vocab.nerc.ac.uk/collection/P01/current/SCNAME01/";
  }
  BasisOfRecord {
    String long_name "BasisOfRecord";
    String units "None";
    String units_uri "None";
  }
  InstitutionCode {
    String long_name "InstitutionCode";
    String units "None";
    String units_uri "None";
  }
  YearCollected {
    Float32 actual_range 1990.0, 1990.0;
    String long_name "YearCollected";
    String units "None";
    String units_uri "None";
  }
  MonthCollected {
    Float32 actual_range 1.0, 1.0;
    String long_name "MonthCollected";
    String units "None";
    String units_uri "None";
  }
  DayCollected {
    Float32 actual_range 27.0, 29.0;
    String long_name "DayCollected";
    String units "None";
    String units_uri "None";
  }
  time {
    String _CoordinateAxisType "Time";
    Float64 actual_range 6.33402e+8, 6.335748e+8;
    String axis "T";
    String ioos_category "Time";
    String long_name "Time";
    String standard_name "time";
    String time_origin "01-JAN-1970 00:00:00";
    String time_precision "1970-01-01T00:00:00Z";
    String units "seconds since 1970-01-01T00:00:00Z";
    String units_uri "https://vocab.nerc.ac.uk/collection/P01/current/CJDY1101";
  }
  MinimumDepth {
    Float32 actual_range 0.0, 100.0;
    String long_name "MinimumDepth";
    String units "None";
    String units_uri "None";
  }
  MaximumDepth {
    Float32 actual_range 0.0, 100.0;
    String long_name "MaximumDepth";
    String units "None";
    String units_uri "None";
  }
  longitude {
    String _CoordinateAxisType "Lon";
    Float32 actual_range 75.0, 75.0;
    String axis "X";
    String ioos_category "Location";
    String long_name "Longitude";
    String standard_name "longitude";
    String units "degrees_east";
    String units_uri "https://vocab.nerc.ac.uk/collection/P01/current/ALONZZ01";
  }
  latitude {
    String _CoordinateAxisType "Lat";
    Float32 actual_range -68.0, -64.5;
    String axis "Y";
    String ioos_category "Location";
    String long_name "Latitude";
    String standard_name "latitude";
    String units "degrees_north";
    String units_uri "https://vocab.nerc.ac.uk/collection/P01/current/ALATZZ01";
  }
  aphia_id {
    String long_name "aphia_id";
    String sdn_P02_name "SeaDataNet biological format biotic parameters";
    String sdn_P02_uri "https://vocab.nerc.ac.uk/collection/P02/current/BPRP/";
    String sdn_P02_urn "SDN:P02::BPRP";
    String sdn_parameter_name "Identifier (LSID) of biological entity specified elsewhere";
    String sdn_parameter_uri "https://vocab.nerc.ac.uk/collection/P01/current/SNANID01/";
    String sdn_parameter_urn "SDN:P01::SNANID01";
    String sdn_uom_name "Not applicable";
    String sdn_uom_uri "https://vocab.nerc.ac.uk/collection/P06/current/XXXX/";
    String sdn_uom_urn "SDN:P06::XXXX";
    String standard_name "aphia_id";
    String units "Not applicable";
    String units_uri "https://vocab.nerc.ac.uk/collection/P01/current/SNANID01/";
  }
  occurrenceID {
    String long_name "occurrenceID";
    String units "None";
    String units_uri "None";
  }
  Cell_volume {
    String altLabel "Cell_volume";
    String long_name "https://vocab.nerc.ac.uk/collection/P01/current/CELLVOLM/";
    String sdn_P02_name "SeaDataNet biological format biotic parameters";
    String sdn_P02_uri "https://vocab.nerc.ac.uk/collection/P02/current/BPRP/";
    String sdn_P02_urn "SDN:P02::BPRP";
    String sdn_parameter_name "Cell volume of biological entity specified elsewhere by cell size measurements and computation using stereometric formulas";
    String sdn_parameter_uri "https://vocab.nerc.ac.uk/collection/P01/current/CELLVOLM/";
    String sdn_parameter_urn "SDN:P01::CELLVOLM";
    String sdn_uom_name "Cubic centimetres";
    String sdn_uom_uri "https://vocab.nerc.ac.uk/collection/P06/current/VVCC/";
    String sdn_uom_urn "SDN:P06::VVCC";
    String standard_name "https://vocab.nerc.ac.uk/collection/p01/current/cellvolm/";
    String units "Cubic centimetres";
    String units_uri "https://vocab.nerc.ac.uk/collection/P01/current/CELLVOLM/";
    String uri "https://vocab.nerc.ac.uk/collection/P01/current/CELLVOLM/";
  }
  WaterAbund {
    String altLabel "WaterAbund";
    String long_name "https://vocab.nerc.ac.uk/collection/P01/current/SDBIOL01/";
    String sdn_P02_name "SeaDataNet biological format biotic parameters";
    String sdn_P02_uri "https://vocab.nerc.ac.uk/collection/P02/current/BPRP/";
    String sdn_P02_urn "SDN:P02::BPRP";
    String sdn_parameter_name "Abundance of biological entity specified elsewhere per unit volume of the water body";
    String sdn_parameter_uri "https://vocab.nerc.ac.uk/collection/P01/current/SDBIOL01/";
    String sdn_parameter_urn "SDN:P01::SDBIOL01";
    String sdn_uom_name "Number per millilitre";
    String sdn_uom_uri "https://vocab.nerc.ac.uk/collection/P06/current/UCML/";
    String sdn_uom_urn "SDN:P06::UCML";
    String standard_name "https://vocab.nerc.ac.uk/collection/p01/current/sdbiol01/";
    String units "Number per millilitre";
    String units_uri "https://vocab.nerc.ac.uk/collection/P01/current/SDBIOL01/";
    String uri "https://vocab.nerc.ac.uk/collection/P01/current/SDBIOL01/";
  }
 }
  NC_GLOBAL {
    String AccConID "21";
    String AccConstrDescription "This license lets others distribute, remix, tweak, and build upon your work, even commercially, as long as they credit you for the original creation. This is the most accommodating of licenses offered. Recommended for maximum dissemination and use of licensed materials.";
    String AccConstrDisplay "This dataset is licensed under a Creative Commons Attribution 4.0 International License.";
    String AccConstrEN "Attribution (CC BY)";
    String AccessConstraint "Attribution (CC BY)";
    String AccessConstraints "None";
    String Acronym "None";
    String added_date "2013-12-09 16:37:38.090000";
    String BrackishFlag "0";
    String CDate "2013-08-14";
    String cdm_data_type "Other";
    String CheckedFlag "0";
    String Citation "Bryantseva Yu. (1990). Phytoplankton data collected during cruise 25 of R/V Skif (January 1990) in the Indian sector of the Southern Ocean. Dataset published in electronic format by IBSS in 2013, consulted via iOBIS on [date].";
    String Comments "None";
    String ContactEmail "None";
    String Conventions "COARDS, CF-1.6, ACDD-1.3";
    String creator_name "Bryantseva, Sergeyeva";
    String CurrencyDate "None";
    String DasID "4358";
    String DasOrigin "Research: field survey";
    String DasType "Data";
    String DasTypeID "1";
    String DateLastModified "{'date': '2024-06-29 01:33:58.600000', 'timezone_type': 1, 'timezone': '+00:00'}";
    String DescrCompFlag "0";
    String DescrTransFlag "0";
    Float64 Easternmost_Easting 75.0;
    String EmbargoDate "None";
    String EngAbstract "Dataset includes phytoplankton data collected during cruise 25 of R/V Skif (January 1990) in the Indian sector of the Southern Ocean.";
    String EngDescr 
"Dataset includes phytoplankton data collected during cruise 25 of R/V Skif (January 1990) in the Indian sector of the Southern Ocean. Samples were taken by 7 L Niskin bathometer at standard depths: 0, 10, 25, 30, 50, and 100 m. Samples were concentrated by reverse filtration through nucleoporous (nuclear) filters with 1 µm size pores. Fixation - 40%  formaldehid or glutar. Cell counts were done with a light microscope (magnification 100, 200, 400 x). Individual biovolumes and biomass (wet weight) were calculated via geometric approximations. 

At IBSS, the data were digitized from paper processing books, quality-controlled and transformed to comply with the Darwin Core/OBIS Schema. Funds for data operations were kindly provided by the Census of Marine Life International Cosmos Prize Fund, through a grant to Rutgers University.";
    String FreshFlag "0";
    Float64 geospatial_lat_max -64.5;
    Float64 geospatial_lat_min -68.0;
    String geospatial_lat_units "degrees_north";
    Float64 geospatial_lon_max 75.0;
    Float64 geospatial_lon_min 75.0;
    String geospatial_lon_units "degrees_east";
    String history 
"2025-03-09T23:01:26Z (local files)
2025-03-09T23:01:26Z http://erddap.eurobis.org/erddap/tabledap/phyto_cosmos_1990.html";
    String infoUrl "None";
    String institution "UkrSCES, NASU-IBSS";
    String keywords "aphia_id, BasisOfRecord, DayCollected, https://vocab.nerc.ac.uk/collection/P01/current/CELLVOLM/, https://vocab.nerc.ac.uk/collection/P01/current/SDBIOL01/, InstitutionCode, latitude, longitude, MaximumDepth, MinimumDepth, MonthCollected, occurrenceID, ScientificName, time, YearCollected";
    String License "https://creativecommons.org/licenses/by/4.0/";
    String license 
"The data may be used and redistributed for free but is not intended
for legal use, since it may contain inaccuracies. Neither the data
Contributor, ERD, NOAA, nor the United States Government, nor any
of their employees or contractors, makes any warranty, express or
implied, including warranties of merchantability and fitness for a
particular purpose, or assumes any legal liability for the accuracy,
completeness, or usefulness, of this information.";
    String Lineage "None";
    String MarineFlag "1";
    String modified_sync "2021-02-05 00:00:00";
    Float64 Northernmost_Northing -64.5;
    String OrigAbstract "None";
    String OrigDescr "None";
    String OrigDescrLang "None";
    String OrigDescrLangNL "None";
    String OrigLangCode "None";
    String OrigLangCodeExtended "None";
    String OrigLangID "None";
    String OrigTitle "None";
    String OrigTitleLang "None";
    String OrigTitleLangCode "None";
    String OrigTitleLangID "None";
    String OrigTitleLangNL "None";
    String Progress "Completed";
    String PublicFlag "1";
    String ReleaseDate "None";
    String ReleaseDate0 "None";
    String RevisionDate "None";
    String SizeReference "488 distribution records";
    String sourceUrl "(local files)";
    Float64 Southernmost_Northing -68.0;
    String standard_name_vocabulary "CF Standard Name Table v70";
    String StandardTitle "Phytoplankton data collected during cruise 25 of R/V Skif (January 1990) in the Indian sector of the Southern Ocean";
    String StatusID "1";
    String subsetVariables "ScientificName,BasisOfRecord,YearCollected,MonthCollected,DayCollected,aphia_id";
    String summary "Dataset includes phytoplankton data collected during cruise 25 of R/V Skif (January 1990) in the Indian sector of the Southern Ocean.";
    String TerrestrialFlag "0";
    String time_coverage_end "1990-01-29T01:00:00Z";
    String time_coverage_start "1990-01-27T01:00:00Z";
    String title "Phytoplankton data collected during cruise 25 of R/V Skif (January 1990) in the Indian sector of the Southern Ocean";
    String UDate "2022-08-01";
    String VersionDate "None";
    String VersionDay "None";
    String VersionMonth "None";
    String VersionName "None";
    String VersionYear "None";
    String VlizCoreFlag "1";
    Float64 Westernmost_Easting 75.0;
  }
}

 

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Using tabledap to Request Data and Graphs from Tabular Datasets

tabledap lets you request a data subset, a graph, or a map from a tabular dataset (for example, buoy data), via a specially formed URL. tabledap uses the OPeNDAP Data Access Protocol (DAP) and its selection constraints.

The URL specifies what you want: the dataset, a description of the graph or the subset of the data, and the file type for the response.

• (easy) You can get data by using the dataset's Data Access Form or Subset form. They make the URL for you.
• (easy) You can make a graph or map by using the dataset's Make A Graph form. It makes the URL for you.
• (not hard) You can bypass the forms and get the data or make a graph or map by generating the URL by hand or with a computer program or script.

Tabledap request URLs must be in the form
https://coastwatch.pfeg.noaa.gov/erddap/tabledap/datasetID.fileType{?query}
For example,
https://coastwatch.pfeg.noaa.gov/erddap/tabledap/pmelTaoDySst.htmlTable?longitude,latitude,time,station,wmo_platform_code,T_25&time>=2015-05-23T12:00:00Z&time<=2015-05-31T12:00:00Z
Thus, the query is often a comma-separated list of desired variable names, followed by a collection of constraints (e.g., variable<value), each preceded by '&' (which is interpreted as "AND").

For details, see the tabledap Documentation.

 

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